July 2013

Journal

Complete genome sequence of Halorhodospira halophila SL1

By:
Challacombe, Jean F; Majid, Sophia; Deole, Ratnakar; Brettin, Thomas; Bruce, David; Delano, Susana; Detter, J; Gleasner, Cheryl; Han, Cliff; Misra, Monica; Reitenga, Krista; Mikhailova, Natalia; Copeland, A; Woyke, Tanja; Pitluck, Samual; Nolan, Matt; Land, Miriam L; Saunders, Elizabeth; Tapia, Roxanne; Lapidus, Alla; Ivanova, N; Hoff, Wouter
Journal Name:
Standards in Genomic Sciences
Page Number:
206-214
Volume:
8
Issue Number:
3
Publication Date:
July 12, 2013
View DOI Listing:
https://doi.org/10.4056/sigs.3677284

Abstract

Halorhodospira halophila is among the most halophilic organisms known. It is an obligately photosynthetic and anaerobic purple sulfur bacterium that exhibits autotrophic growth up to saturated NaCl concentrations. The type strain H. halophila SL1 was isolated from a hypersaline lake in Oregon. Here we report the determination of its entire genome in a single contig. This is the first genome of a phototrophic extreme halophile. The genome consists of 2,678,452 bp, encoding 2493 predicted genes as determined by automated genome annotation. Of the 2407 predicted proteins, 1905 were assigned to a putative function. Future detailed analysis of this genome promises to yield insights into the halophilic adaptations of this organism, its ability for photoautotrophic growth under extreme conditions, and its characteristic sulfur metabolism.