January 2013

Journal

Complete genome sequence of Terriglobus saanensis type strain SP1PR4T, an Acidobacteria from tundra soil

By:
Rawat, Suman; Mannisto, Minna; Starovoytov, Valentin; Goodwin, Lynne; Nolan, Matt; Hauser, Loren J; Land, Miriam L; Davenport, Karen; Woyke, Tanja; Haggblom, Max
Journal Name:
Standards in Genomic Sciences
Page Number:
59-69
Volume:
7
Issue Number:
1
Publication Date:
January 3, 2013
View DOI Listing:
https://doi.org/10.4056/sigs.3036810

Abstract

Terriglobus saanensis SP1PR4T is a novel species of the genus Terriglobus. T. saanensis is of ecological interest because it is a representative of the phylum Acidobacteria, which are dominant members of bacterial soil microbiota in Arctic ecosystems. T. saanensis is a cold-adapted acidophile and a versatile heterotroph utilizing a suite of simple sugars and complex polysaccharides. The genome contained an abundance of genes assigned to metabolism and transport of carbohydrates including gene modules encoding for carbohydrate-active enzyme (CAZyme) family involved in breakdown, utilization and biosynthesis of diverse structural and storage polysaccharides. T. saanensis SP1PR4T represents the first member of genus Terriglobus with a completed genome sequence, consisting of a single replicon of 5,095,226 base pairs (bp), 54 RNA genes and 4,279 protein-coding genes. We infer that the physiology and metabolic potential of T. saanensis is adapted to allow for resilience to the nutrient-deficient conditions and fluctuating temperatures of Arctic tundra soils.